Summary information and primary citation

PDB-id
1qa6; SNAP-derived features in text and JSON formats; DNAproDB
Class
ribosome
Method
X-ray (2.8 Å)
Summary
Crystal structure of a conserved ribosomal protein-RNA complex
Reference
Conn GL, Draper DE, Lattman EE, Gittis AG (1999): "Crystal structure of a conserved ribosomal protein-RNA complex." Science, 284, 1171-1174. doi: 10.1126/science.284.5417.1171.
Abstract
The structure of a highly conserved complex between a 58-nucleotide domain of large subunit ribosomal RNA and the RNA-binding domain of ribosomal protein L11 has been solved at 2.8 angstrom resolution. It reveals a precisely folded RNA structure that is stabilized by extensive tertiary contacts and contains an unusually large core of stacked bases. A bulge loop base from one hairpin of the RNA is intercalated into the distorted major groove of another helix; the protein locks this tertiary interaction into place by binding to the intercalated base from the minor groove side. This direct interaction with a key ribosomal RNA tertiary interaction suggests that part of the role of L11 is to stabilize an unusual RNA fold within the ribosome.

Cartoon-block schematics in six views (download the tarball)

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