Summary information and primary citation

PDB-id
1zla; SNAP-derived features in text and JSON formats; DNAproDB
Class
structural protein-DNA
Method
X-ray (2.9 Å)
Summary
X-ray structure of a kaposi's sarcoma herpesvirus lana peptide bound to the nucleosomal core
Reference
Barbera AJ, Chodaparambil JV, Kelley-Clarke B, Joukov V, Walter JC, Luger K, Kaye KM (2006): "The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA." Science, 311, 856-861. doi: 10.1126/science.1120541.
Abstract
Kaposi's sarcoma-associated herpesvirus (KSHV) latency-associated nuclear antigen (LANA) mediates viral genome attachment to mitotic chromosomes. We find that N-terminal LANA docks onto chromosomes by binding nucleosomes through the folded region of histones H2A-H2B. The same LANA residues were required for both H2A-H2B binding and chromosome association. Further, LANA did not bind Xenopus sperm chromatin, which is deficient in H2A-H2B; chromatin binding was rescued after assembly of nucleosomes containing H2A-H2B. We also describe the 2.9-angstrom crystal structure of a nucleosome complexed with the first 23 LANA amino acids. The LANA peptide forms a hairpin that interacts exclusively with an acidic H2A-H2B region that is implicated in the formation of higher order chromatin structure. Our findings present a paradigm for how nucleosomes may serve as binding platforms for viral and cellular proteins and reveal a previously unknown mechanism for KSHV latency.

Cartoon-block schematics in six views (download the tarball)

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