Summary information and primary citation

PDB-id
2az2; SNAP-derived features in text and JSON formats; DNAproDB
Class
viral protein-RNA
Method
X-ray (2.6 Å)
Summary
Flock house virus b2-dsrna complex (p4122)
Reference
Chao JA, Lee JH, Chapados BR, Debler EW, Schneemann A, Williamson JR (2005): "Dual modes of RNA-silencing suppression by Flock House virus protein B2." Nat.Struct.Mol.Biol., 12, 952-957. doi: 10.1038/nsmb1005.
Abstract
As a counter-defense against antiviral RNA silencing during infection, the insect Flock House virus (FHV) expresses the silencing suppressor protein B2. Biochemical experiments show that B2 binds to double-stranded RNA (dsRNA) without regard to length and inhibits cleavage of dsRNA by Dicer in vitro. A cocrystal structure reveals that a B2 dimer forms a four-helix bundle that binds to one face of an A-form RNA duplex independently of sequence. These results suggest that B2 blocks both cleavage of the FHV genome by Dicer and incorporation of FHV small interfering RNAs into the RNA-induced silencing complex.

Cartoon-block schematics in six views (download the tarball)

PyMOL session file Download PDB file View in 3Dmol.js