Summary information and primary citation

PDB-id
2xkk; SNAP-derived features in text and JSON formats; DNAproDB
Class
isomerase-DNA-antibiotic
Method
X-ray (3.25 Å)
Summary
Crystal structure of moxifloxacin, DNA, and a. baumannii topo iv (pare-parc fusion truncate)
Reference
Wohlkonig A, Chan PF, Fosberry AP, Homes P, Huang J, Kranz M, Leydon VR, Miles TJ, Pearson ND, Perera RL, Shillings AJ, Gwynn MN, Bax BD (2010): "Structural Basis of Quinolone Inhibition of Type Iia Topoisomerases and Target-Mediated Resistance." Nat.Struct.Mol.Biol., 17, 1152. doi: 10.1038/NSMB.1892.
Abstract
Quinolone antibacterials have been used to treat bacterial infections for over 40 years. A crystal structure of moxifloxacin in complex with Acinetobacter baumannii topoisomerase IV now shows the wedge-shaped quinolone stacking between base pairs at the DNA cleavage site and binding conserved residues in the DNA cleavage domain through chelation of a noncatalytic magnesium ion. This provides a molecular basis for the quinolone inhibition mechanism, resistance mutations and invariant quinolone antibacterial structural features.

Cartoon-block schematics in six views (download the tarball)

PyMOL session file Download PDB file View in 3Dmol.js