Summary information and primary citation

PDB-id
6fm4; SNAP-derived features in text and JSON formats; DNAproDB
Class
isomerase
Method
X-ray (2.7 Å)
Summary
The crystal structure of s. aureus gyrase complex with id-130 and DNA
Reference
Magaro G, Prati F, Garofalo B, Corso G, Furlotti G, Apicella C, Mangano G, D'Atanasio N, Robinson D, Di Giorgio FP, Ombrato R (2019): "Virtual Screening Approach and Investigation of Structure-Activity Relationships To Discover Novel Bacterial Topoisomerase Inhibitors Targeting Gram-Positive and Gram-Negative Pathogens." J.Med.Chem., 62, 7445-7472. doi: 10.1021/acs.jmedchem.9b00394.
Abstract
Bacterial resistance is increasing rapidly, requiring urgent identification of new antibacterial drugs that are effective against multidrug-resistant pathogens. Novel bacterial topoisomerase inhibitors (NBTIs) provide a new strategy for investigating the well-validated DNA gyrase and topoisomerase IV targets while preventing cross-resistance issues. On this basis, starting from a virtual screening campaign and subsequent structure-based hit optimization guided by X-ray studies, a novel class of piperazine-like NBTIs with outstanding enzymatic activity against Staphylococcus aureus and Escherichia coli DNA gyrase and topoisomerase IV was identified. Notably, compounds

Cartoon-block schematics in six views (download the tarball)

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