Summary information and primary citation

PDB-id
7z52; SNAP-derived features in text and JSON formats; DNAproDB
Class
RNA binding protein
Method
cryo-EM (3.4 Å)
Summary
Human next dimer - focused reconstruction of the single mtr4
Reference
Gerlach P, Garland W, Lingaraju M, Salerno-Kochan A, Bonneau F, Basquin J, Jensen TH, Conti E (2022): "Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome." Mol.Cell, 82, 2505. doi: 10.1016/j.molcel.2022.04.011.
Abstract
In mammalian cells, spurious transcription results in a vast repertoire of unproductive non-coding RNAs, whose deleterious accumulation is prevented by rapid decay. The nuclear exosome targeting (NEXT) complex plays a central role in directing non-functional transcripts to exosome-mediated degradation, but the structural and molecular mechanisms remain enigmatic. Here, we elucidated the architecture of the human NEXT complex, showing that it exists as a dimer of MTR4-ZCCHC8-RBM7 heterotrimers. Dimerization preconfigures the major MTR4-binding region of ZCCHC8 and arranges the two MTR4 helicases opposite to each other, with each protomer able to function on many types of RNAs. In the inactive state of the complex, the 3' end of an RNA substrate is enclosed in the MTR4 helicase channel by a ZCCHC8 C-terminal gatekeeping domain. The architecture of a NEXT-exosome assembly points to the molecular and regulatory mechanisms with which the NEXT complex guides RNA substrates to the exosome.

Cartoon-block schematics in six views (download the tarball)

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