SNAP output for PDB entry 8d8m [SNAP web server]

PDB-id

8d8m; SNAP-derived features in text and JSON formats; DNAproDB

Class

DNA binding protein-DNA

Method

X-ray (3.1 Å)

Summary

Isoreticular, interpenetrating co-crystal of replication initiator protein repe54 and symmetrical expanded duplex (31mer) containing the cognate repe54 sequence and an additional g-c rich sequence grown in a calcium chloride crystallization solution.

Reference

Orun AR, Shields ET, Dmytriw S, Vajapayajula A, Snow CD: "Designed crystalline assemblies of protein and DNA enable site-specific installation of a guest protein, DNA, and small molecule."

Abstract