SNAP output for PDB entry 8tiw [SNAP web server]

PDB-id

8tiw; SNAP-derived features in text and JSON formats; DNAproDB

Class

DNA binding protein-DNA

Method

X-ray (3.11 Å)

Summary

Isoreticular, interpenetrating co-crystal of replication initiator protein repe54 and symmetrical expanded duplex (31mer) containing the cognate repe54 sequence and an additional g-c rich sequence with blunt ends and 3' terminal phosphates and crosslinked with edc.

Reference

Orun AR, Slaughter CK, Shields ET, Vajapayajula A, Jones S, Shrestha R, Snow CD (2024): "Tuning Chemical DNA Ligation within DNA Crystals and Protein-DNA Cocrystals." Acs Nanosci Au, 4, 338-348. doi: 10.1021/acsnanoscienceau.4c00013.

Abstract